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FIJI: Macro Writing for Biologists
Learn how to automate your analysis workflow in FIJI/Image J
About this Event
The FIJI Macro writing for Biologists workshop runs over two half-days, with follow up sessions to assist you with completing your own code. To get the most out of this workshop, you should have your own images and an image analysis workflow that you want to implement.
Day 1 (1-5pm, 11th November): We will provide introduction to the syntax of ImageJ macro language and practice basic tools (e.g. loops, condition, array). This is suitable for biologist with no previous coding knowledge. If you are coding often, you can attend day2 only, but make sure to browse the day1 material beforehand!
Day 2 (1-5pm, 12th November): We will go through few examples of image analysis workflows. Using these as templates, you can start to write your own macro using your own image (submitted during registration). You are NOT expected to complete your script on this day but continue to work at your own pace after this session.
Follow up sessions: Individuals will be able to book in a 1:1 consulting session after the main workshop to get feedback/advice on their macro writing .